What is johnson grass allergy
<p>This subsection of the <a href=»»>Sequence</a> section indicates if the <a href=»»>canonical sequence</a> displayed by default in the entry is finish or not.<p><a href=’/help/sequence_status’ target=’_top’>More</a></p>Sequence statusi: Complete.
Sequence databases
12,
October 29, — v1
51F90B06FAA
GO
<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href=’/help/names_and_taxonomy_section’ target=’_top’>More</a></p>Names & Taxonomyi
<p>This subsection of the <a href=»»>Names and taxonomy</a> section provides an exhaustive list of every names of the protein, from commonly used to obsolete, to permit unambiguous identification of a protein.<p><a href=’/help/protein_names’ target=’_top’>More</a></p>Protein namesi |
Submitted name: Group 2 allergen Sor h <p>Information which has been imported from another database using automatic procedures.</p> <p><a href=»/manual/evidences#ECO»>More</a></p> Automatic assertion inferred from database entriesi |
<p>This subsection of the <a href=»»>Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href=’/help/organism-name’ target=’_top’>More</a></p>Organismi | Sorghum halepense (Johnson grass) (Holcus halepensis)
Automatic assertion inferred from database entriesi |
<p>This subsection of the <a href=»»>Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein.
This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href=’/help/taxonomic_identifier’ target=’_top’>More</a></p>Taxonomic identifieri |
[NCBI] |
<p>This subsection of the <a href=»»>Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href=’/help/taxonomic_lineage’ target=’_top’>More</a></p>Taxonomic lineagei | cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliopsida › Mesangiospermae › Liliopsida › Petrosaviidae › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogonodae › Andropogoneae › Sorghinae › Sorghum |
<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href=’/help/family_and_domains_section’ target=’_top’>More</a></p>Family & Domainsi
<p>UniProtKB Keywords constitute a <a href=»»>controlled vocabulary</a> with a hierarchical structure.
Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href=’/help/keywords’ target=’_top’>More</a></p>Keywords — Domaini
Signal
Automatic assertion according to sequence analysisi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
<p>This subsection of the <a href=»»>Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href=’/help/domain’ target=’_top’>More</a></p>Domaini | 50 – | Expansin-like CBD
<p>Information which has been generated by the UniProtKB automatic annotation system, without manual validation.</p> <p><a href=»/manual/evidences#ECO»>More</a></p> Automatic assertion inferred from signature matchi AddBLAST |
68 |
Family and domain databases
Gene3D Structural and Functional Annotation of Protein Families MoreGene3Di |
, 1 hit |
Integrated resource of protein families, domains and functional sites MoreInterProi |
View protein in InterPro IPR Expansin_CBD IPR Expansin_CBD_sf |
Pfam protein domain database MorePfami |
View protein in Pfam PF Pollen_allerg_1, 1 hit |
Superfamily database of structural and functional annotation MoreSUPFAMi |
SSF SSF, 1 hit |
PROSITE; a protein domain and family database MorePROSITEi |
View protein in PROSITE PS EXPANSIN_CBD, 1 hit |
<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href=’/help/pathology_and_biotech_section’ target=’_top’>More</a></p>Pathology & Biotechi
Protein family/group databases
Allergome; a platform for allergen knowledge MoreAllergomei |
Sor h 2 Sor h |
<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href=’/help/ptm_processing_section’ target=’_top’>More</a></p>PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href=’/help/signal’ target=’_top’>More</a></p>Signal peptidei | 1 – 25 |
<p>Information which has been generated by the UniProtKB automatic annotation system, without manual validation.</p> <p><a href=»/manual/evidences#ECO»>More</a></p> Automatic assertion according to sequence analysisi AddBLAST |
25 | |
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href=’/help/chain’ target=’_top’>More</a></p>ChainiPRO_ | 26 – |
Automatic assertion according to sequence analysisi AddBLAST |
96 |
<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at diverse levels of sequence identity thresholds (%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href=»»>UniRef</a>).<p><a href=’/help/similar_proteins_section’ target=’_top’>More</a></p>Similar proteinsi
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Submitted name:
Group 2 allergen Sor h
N/A
Sorghum halepense (Johnson grass) (Holcus halepensis)
Unreviewed-Annotation score:
Annotation score:1 out of 5
<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome.
This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href=’/help/annotation_score’ target=’_top’>More</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href=’/help/protein_existence’ target=’_top’>More</a></p>
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